Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Satb1Q60611 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Satb1Q60611 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.85□□□□□ -0.03
Satb1Q60611 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Satb1Q60611 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Satb1Q60611 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Satb1Q60611 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Mir1247-201ENSMUST00000116706 82 ntBASIC14.85□□□□□ -0.03
Satb1Q60611 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.85□□□□□ -0.03
Satb1Q60611 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.85□□□□□ -0.03
Satb1Q60611 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.85□□□□□ -0.03
Satb1Q60611 Gm27920-201ENSMUST00000183953 96 ntBASIC14.85□□□□□ -0.03
Satb1Q60611 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.85□□□□□ -0.03
Satb1Q60611 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.85□□□□□ -0.03
Satb1Q60611 Gm9257-201ENSMUST00000221254 232 ntBASIC14.85□□□□□ -0.03
Satb1Q60611 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Satb1Q60611 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Satb1Q60611 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Satb1Q60611 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Satb1Q60611 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.85□□□□□ -0.03
Satb1Q60611 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.84□□□□□ -0.03
Satb1Q60611 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Satb1Q60611 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.84□□□□□ -0.03
Satb1Q60611 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.84□□□□□ -0.03
Satb1Q60611 Gm5035-201ENSMUST00000215581 927 ntBASIC14.84□□□□□ -0.03
Satb1Q60611 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.84□□□□□ -0.03
Satb1Q60611 Gm18624-201ENSMUST00000220966 658 ntBASIC14.84□□□□□ -0.03
Satb1Q60611 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.84□□□□□ -0.03
Satb1Q60611 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.84□□□□□ -0.03
Satb1Q60611 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Satb1Q60611 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Satb1Q60611 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Satb1Q60611 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Satb1Q60611 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Satb1Q60611 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.83□□□□□ -0.04
Satb1Q60611 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.83□□□□□ -0.04
Satb1Q60611 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Satb1Q60611 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.83□□□□□ -0.04
Satb1Q60611 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Satb1Q60611 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Satb1Q60611 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms