Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps54Q5SPW0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Gm15653-201ENSMUST00000119247 907 ntBASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Gm15487-201ENSMUST00000122373 465 ntBASIC17.18■□□□□ 0.34
Vps54Q5SPW0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.18■□□□□ 0.34
Vps54Q5SPW0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Gm15957-201ENSMUST00000118893 974 ntBASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps54Q5SPW0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps54Q5SPW0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms