Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Gm18889-201ENSMUST00000174284 929 ntBASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Gm11594-201ENSMUST00000122313 162 ntBASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf20Q5DTM8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Gm13365-201ENSMUST00000121188 973 ntBASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf20Q5DTM8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms