Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Gm13226-201ENSMUST00000117838 404 ntBASIC13.2□□□□□ -0.3
Urb1Q571H0 Gm12341-201ENSMUST00000119724 503 ntBASIC13.2□□□□□ -0.3
Urb1Q571H0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Gm45331-201ENSMUST00000209868 554 ntBASIC13.2□□□□□ -0.3
Urb1Q571H0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Urb1Q571H0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.2□□□□□ -0.3
Urb1Q571H0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.19□□□□□ -0.3
Urb1Q571H0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Gm8062-201ENSMUST00000139696 444 ntBASIC13.19□□□□□ -0.3
Urb1Q571H0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Urb1Q571H0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Urb1Q571H0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Urb1Q571H0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Urb1Q571H0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Urb1Q571H0 Gm4984-201ENSMUST00000115987 360 ntBASIC13.18□□□□□ -0.3
Urb1Q571H0 Gm12742-201ENSMUST00000117326 410 ntBASIC13.18□□□□□ -0.3
Urb1Q571H0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Urb1Q571H0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.18□□□□□ -0.3
Urb1Q571H0 Gm37230-201ENSMUST00000194491 818 ntBASIC13.18□□□□□ -0.3
Urb1Q571H0 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.18□□□□□ -0.3
Urb1Q571H0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.18□□□□□ -0.3
Urb1Q571H0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.18□□□□□ -0.3
Urb1Q571H0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Gm15806-201ENSMUST00000120696 955 ntBASIC13.18□□□□□ -0.3
Urb1Q571H0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Urb1Q571H0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.17□□□□□ -0.3
Urb1Q571H0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Urb1Q571H0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.17□□□□□ -0.3
Urb1Q571H0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.17□□□□□ -0.3
Urb1Q571H0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Urb1Q571H0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms