Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.31■□□□□ 0.2
Gm28047Q3US59 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28047Q3US59 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.3■□□□□ 0.2
Gm28047Q3US59 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Gm28047Q3US59 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.3■□□□□ 0.2
Gm28047Q3US59 Gm12882-201ENSMUST00000121696 517 ntBASIC16.3■□□□□ 0.2
Gm28047Q3US59 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 AW822252-206ENSMUST00000208904 237 ntBASIC16.3■□□□□ 0.2
Gm28047Q3US59 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.3■□□□□ 0.2
Gm28047Q3US59 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28047Q3US59 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Gm27525-201ENSMUST00000184465 107 ntBASIC16.29■□□□□ 0.2
Gm28047Q3US59 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.29■□□□□ 0.2
Gm28047Q3US59 Gm44771-201ENSMUST00000206975 626 ntBASIC16.29■□□□□ 0.2
Gm28047Q3US59 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.29■□□□□ 0.2
Gm28047Q3US59 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28047Q3US59 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.28■□□□□ 0.2
Gm28047Q3US59 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28047Q3US59 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms