Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm8885-201ENSMUST00000189382 598 ntBASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm8176-201ENSMUST00000191297 1099 ntBASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm8365-201ENSMUST00000197334 648 ntBASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC21.57■■□□□ 1.04
Col17a1Q07563 AC135469.1-201ENSMUST00000225984 772 ntBASIC21.57■■□□□ 1.04
Col17a1Q07563 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.57■■□□□ 1.04
Col17a1Q07563 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Gm13859-201ENSMUST00000119936 1423 ntBASIC21.56■■□□□ 1.04
Col17a1Q07563 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC21.56■■□□□ 1.04
Col17a1Q07563 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC21.56■■□□□ 1.04
Col17a1Q07563 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col17a1Q07563 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Col17a1Q07563 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Col17a1Q07563 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC21.55■■□□□ 1.04
Col17a1Q07563 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Col17a1Q07563 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC21.55■■□□□ 1.04
Col17a1Q07563 Gm29608-201ENSMUST00000190444 463 ntBASIC21.55■■□□□ 1.04
Col17a1Q07563 Gm44405-201ENSMUST00000198952 126 ntBASIC21.55■■□□□ 1.04
Col17a1Q07563 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col17a1Q07563 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC21.54■■□□□ 1.04
Col17a1Q07563 Gm44775-201ENSMUST00000207266 1456 ntBASIC21.54■■□□□ 1.04
Col17a1Q07563 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC21.54■■□□□ 1.04
Col17a1Q07563 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Col17a1Q07563 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Col17a1Q07563 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Gm9755-201ENSMUST00000032981 1356 ntBASIC21.54■■□□□ 1.04
Col17a1Q07563 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col17a1Q07563 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Col17a1Q07563 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC21.53■■□□□ 1.04
Col17a1Q07563 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC21.53■■□□□ 1.04
Col17a1Q07563 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC21.53■■□□□ 1.04
Col17a1Q07563 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Col17a1Q07563 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.53■■□□□ 1.04
Col17a1Q07563 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Col17a1Q07563 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC21.53■■□□□ 1.04
Col17a1Q07563 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col17a1Q07563 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC21.52■■□□□ 1.04
Col17a1Q07563 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
Col17a1Q07563 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col17a1Q07563 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Col17a1Q07563 Gm27552-201ENSMUST00000183351 62 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms