Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Col10a1Q05306 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col10a1Q05306 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col10a1Q05306 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col10a1Q05306 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col10a1Q05306 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Col10a1Q05306 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.23□□□□□ -0.29
Col10a1Q05306 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.23□□□□□ -0.29
Col10a1Q05306 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.23□□□□□ -0.29
Col10a1Q05306 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.23□□□□□ -0.29
Col10a1Q05306 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.23□□□□□ -0.29
Col10a1Q05306 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.23□□□□□ -0.29
Col10a1Q05306 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.23□□□□□ -0.29
Col10a1Q05306 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col10a1Q05306 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col10a1Q05306 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.22□□□□□ -0.29
Col10a1Q05306 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Gm10275-202ENSMUST00000168697 495 ntBASIC13.22□□□□□ -0.29
Col10a1Q05306 Gm25948-201ENSMUST00000175334 112 ntBASIC13.22□□□□□ -0.29
Col10a1Q05306 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.22□□□□□ -0.29
Col10a1Q05306 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Gm29541-201ENSMUST00000191351 678 ntBASIC13.22□□□□□ -0.29
Col10a1Q05306 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Gm10275-201ENSMUST00000092620 635 ntBASIC13.22□□□□□ -0.29
Col10a1Q05306 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col10a1Q05306 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col10a1Q05306 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms