Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a2Q02788 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.31□□□□□ -0.12
Col6a2Q02788 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col6a2Q02788 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Col6a2Q02788 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a2Q02788 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a2Q02788 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.31□□□□□ -0.12
Col6a2Q02788 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col6a2Q02788 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Col6a2Q02788 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.31□□□□□ -0.12
Col6a2Q02788 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a2Q02788 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Col6a2Q02788 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.3□□□□□ -0.12
Col6a2Q02788 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a2Q02788 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.3□□□□□ -0.12
Col6a2Q02788 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col6a2Q02788 Gm15653-201ENSMUST00000119247 907 ntBASIC14.3□□□□□ -0.12
Col6a2Q02788 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.3□□□□□ -0.12
Col6a2Q02788 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.3□□□□□ -0.12
Col6a2Q02788 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.3□□□□□ -0.12
Col6a2Q02788 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.3□□□□□ -0.12
Col6a2Q02788 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col6a2Q02788 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a2Q02788 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Col6a2Q02788 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col6a2Q02788 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Col6a2Q02788 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.29□□□□□ -0.12
Col6a2Q02788 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col6a2Q02788 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.29□□□□□ -0.12
Col6a2Q02788 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Col6a2Q02788 Gm27437-201ENSMUST00000183429 107 ntBASIC14.29□□□□□ -0.12
Col6a2Q02788 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.29□□□□□ -0.12
Col6a2Q02788 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.29□□□□□ -0.12
Col6a2Q02788 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.29□□□□□ -0.12
Col6a2Q02788 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col6a2Q02788 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Col6a2Q02788 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col6a2Q02788 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a2Q02788 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a2Q02788 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms