Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gabpb1Q00420 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gm12882-201ENSMUST00000121696 517 ntBASIC14.56□□□□□ -0.08
Gabpb1Q00420 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.56□□□□□ -0.08
Gabpb1Q00420 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.56□□□□□ -0.08
Gabpb1Q00420 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gabpb1Q00420 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.55□□□□□ -0.08
Gabpb1Q00420 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.55□□□□□ -0.08
Gabpb1Q00420 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.55□□□□□ -0.08
Gabpb1Q00420 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.55□□□□□ -0.08
Gabpb1Q00420 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gabpb1Q00420 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.54□□□□□ -0.08
Gabpb1Q00420 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gabpb1Q00420 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gabpb1Q00420 Gm4995-201ENSMUST00000117247 432 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms