Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
SgcaP82350 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcaP82350 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SgcaP82350 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.03□□□□□ -0.48
SgcaP82350 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.03□□□□□ -0.48
SgcaP82350 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcaP82350 Olfr129-201ENSMUST00000122318 993 ntBASIC12.03□□□□□ -0.48
SgcaP82350 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcaP82350 Gm25927-201ENSMUST00000175058 117 ntBASIC12.03□□□□□ -0.48
SgcaP82350 Gm23634-201ENSMUST00000175071 91 ntBASIC12.03□□□□□ -0.48
SgcaP82350 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.03□□□□□ -0.48
SgcaP82350 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SgcaP82350 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
SgcaP82350 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SgcaP82350 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.03□□□□□ -0.48
SgcaP82350 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SgcaP82350 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.03□□□□□ -0.48
SgcaP82350 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.03□□□□□ -0.48
SgcaP82350 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcaP82350 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcaP82350 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcaP82350 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcaP82350 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcaP82350 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcaP82350 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcaP82350 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Gm13836-201ENSMUST00000121159 501 ntBASIC12.02□□□□□ -0.49
SgcaP82350 AA414768-201ENSMUST00000121924 1257 ntBASIC12.02□□□□□ -0.49
SgcaP82350 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
SgcaP82350 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SgcaP82350 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.02□□□□□ -0.49
SgcaP82350 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcaP82350 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcaP82350 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SgcaP82350 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SgcaP82350 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
SgcaP82350 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.01□□□□□ -0.49
SgcaP82350 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SgcaP82350 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.01□□□□□ -0.49
SgcaP82350 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.01□□□□□ -0.49
SgcaP82350 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.01□□□□□ -0.49
SgcaP82350 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms