Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.66□□□□□ -0.38
Sec61a1P61620 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.66□□□□□ -0.38
Sec61a1P61620 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Sec61a1P61620 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.66□□□□□ -0.38
Sec61a1P61620 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.66□□□□□ -0.38
Sec61a1P61620 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.66□□□□□ -0.38
Sec61a1P61620 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.66□□□□□ -0.38
Sec61a1P61620 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.65□□□□□ -0.38
Sec61a1P61620 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Mir3113-201ENSMUST00000175478 76 ntBASIC12.65□□□□□ -0.38
Sec61a1P61620 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.65□□□□□ -0.38
Sec61a1P61620 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.65□□□□□ -0.38
Sec61a1P61620 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.65□□□□□ -0.38
Sec61a1P61620 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Gm10175-201ENSMUST00000086013 645 ntBASIC12.65□□□□□ -0.38
Sec61a1P61620 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.65□□□□□ -0.38
Sec61a1P61620 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a1P61620 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sec61a1P61620 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Sec61a1P61620 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sec61a1P61620 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sec61a1P61620 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sec61a1P61620 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Gm14822-201ENSMUST00000122247 291 ntBASIC12.64□□□□□ -0.39
Sec61a1P61620 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.64□□□□□ -0.39
Sec61a1P61620 Gm27702-201ENSMUST00000184512 56 ntBASIC12.64□□□□□ -0.39
Sec61a1P61620 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.64□□□□□ -0.39
Sec61a1P61620 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.64□□□□□ -0.39
Sec61a1P61620 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.64□□□□□ -0.39
Sec61a1P61620 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms