Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Tpm1P58771 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16■□□□□ 0.15
Tpm1P58771 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Tpm1P58771 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.99■□□□□ 0.15
Tpm1P58771 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.99■□□□□ 0.15
Tpm1P58771 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Tpm1P58771 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tpm1P58771 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.99■□□□□ 0.15
Tpm1P58771 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.99■□□□□ 0.15
Tpm1P58771 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Tpm1P58771 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tpm1P58771 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.98■□□□□ 0.15
Tpm1P58771 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.98■□□□□ 0.15
Tpm1P58771 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.98■□□□□ 0.15
Tpm1P58771 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.98■□□□□ 0.15
Tpm1P58771 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.98■□□□□ 0.15
Tpm1P58771 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.98■□□□□ 0.15
Tpm1P58771 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.98■□□□□ 0.15
Tpm1P58771 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Tpm1P58771 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Tpm1P58771 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Tpm1P58771 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Tpm1P58771 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Tpm1P58771 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tpm1P58771 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.97■□□□□ 0.15
Tpm1P58771 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tpm1P58771 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Tpm1P58771 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Tpm1P58771 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.97■□□□□ 0.15
Tpm1P58771 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Tpm1P58771 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.97■□□□□ 0.15
Tpm1P58771 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Tpm1P58771 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.97■□□□□ 0.15
Tpm1P58771 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Gm18669-201ENSMUST00000216049 778 ntBASIC15.97■□□□□ 0.15
Tpm1P58771 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms