Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SmoP56726 Gm4875-201ENSMUST00000118257 786 ntBASIC14.4□□□□□ -0.1
SmoP56726 Gm14719-201ENSMUST00000121891 340 ntBASIC14.4□□□□□ -0.1
SmoP56726 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.4□□□□□ -0.1
SmoP56726 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.4□□□□□ -0.1
SmoP56726 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SmoP56726 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SmoP56726 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.4□□□□□ -0.1
SmoP56726 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SmoP56726 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.11
SmoP56726 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
SmoP56726 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
SmoP56726 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
SmoP56726 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.39□□□□□ -0.11
SmoP56726 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.39□□□□□ -0.11
SmoP56726 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Gm27838-201ENSMUST00000184829 128 ntBASIC14.39□□□□□ -0.11
SmoP56726 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.39□□□□□ -0.11
SmoP56726 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.39□□□□□ -0.11
SmoP56726 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.39□□□□□ -0.11
SmoP56726 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.39□□□□□ -0.11
SmoP56726 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SmoP56726 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SmoP56726 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SmoP56726 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SmoP56726 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SmoP56726 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.38□□□□□ -0.11
SmoP56726 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.38□□□□□ -0.11
SmoP56726 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.38□□□□□ -0.11
SmoP56726 Gm33320-201ENSMUST00000192232 530 ntBASIC14.38□□□□□ -0.11
SmoP56726 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.38□□□□□ -0.11
SmoP56726 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.38□□□□□ -0.11
SmoP56726 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.38□□□□□ -0.11
SmoP56726 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.38□□□□□ -0.11
SmoP56726 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.38□□□□□ -0.11
SmoP56726 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.38□□□□□ -0.11
SmoP56726 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SmoP56726 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SmoP56726 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SmoP56726 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SmoP56726 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SmoP56726 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms