Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Cdh11P55288 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh11P55288 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.1□□□□□ -0.31
Cdh11P55288 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.1□□□□□ -0.31
Cdh11P55288 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh11P55288 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdh11P55288 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdh11P55288 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdh11P55288 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.09□□□□□ -0.31
Cdh11P55288 Gm18246-201ENSMUST00000221023 728 ntBASIC13.09□□□□□ -0.31
Cdh11P55288 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdh11P55288 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdh11P55288 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdh11P55288 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh11P55288 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cdh11P55288 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh11P55288 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh11P55288 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh11P55288 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.08□□□□□ -0.31
Cdh11P55288 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh11P55288 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh11P55288 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.08□□□□□ -0.32
Cdh11P55288 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh11P55288 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh11P55288 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh11P55288 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh11P55288 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdh11P55288 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh11P55288 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdh11P55288 Gm10499-201ENSMUST00000174094 934 ntBASIC13.07□□□□□ -0.32
Cdh11P55288 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms