Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.34□□□□□ -0.11
Fdft1P53798 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.34□□□□□ -0.11
Fdft1P53798 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Fdft1P53798 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fdft1P53798 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.33□□□□□ -0.11
Fdft1P53798 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fdft1P53798 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fdft1P53798 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.33□□□□□ -0.11
Fdft1P53798 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fdft1P53798 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fdft1P53798 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Fdft1P53798 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Fdft1P53798 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Fdft1P53798 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Fdft1P53798 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.33□□□□□ -0.12
Fdft1P53798 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Fdft1P53798 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.33□□□□□ -0.12
Fdft1P53798 Olfr286-202ENSMUST00000205305 969 ntBASIC14.33□□□□□ -0.12
Fdft1P53798 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Fdft1P53798 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Fdft1P53798 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Fdft1P53798 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Fdft1P53798 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.33□□□□□ -0.12
Fdft1P53798 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Fdft1P53798 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fdft1P53798 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Fdft1P53798 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Fdft1P53798 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.32□□□□□ -0.12
Fdft1P53798 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.32□□□□□ -0.12
Fdft1P53798 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Fdft1P53798 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Gm15427-201ENSMUST00000117288 531 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Gm14494-201ENSMUST00000118786 435 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Gm15483-201ENSMUST00000120338 456 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Fdft1P53798 Rpph1-201ENSMUST00000175096 319 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Gm27525-201ENSMUST00000184465 107 ntBASIC14.32□□□□□ -0.12
Fdft1P53798 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.32□□□□□ -0.12
Fdft1P53798 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.32□□□□□ -0.12
Fdft1P53798 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.32□□□□□ -0.12
Fdft1P53798 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fdft1P53798 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.31□□□□□ -0.12
Fdft1P53798 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fdft1P53798 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Fdft1P53798 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fdft1P53798 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fdft1P53798 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Fdft1P53798 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.31□□□□□ -0.12
Fdft1P53798 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fdft1P53798 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Fdft1P53798 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fdft1P53798 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Fdft1P53798 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms