Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox2P48432 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Sox2P48432 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.46□□□□□ -0.25
Sox2P48432 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox2P48432 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.46□□□□□ -0.25
Sox2P48432 Gm15173-201ENSMUST00000122049 433 ntBASIC13.46□□□□□ -0.25
Sox2P48432 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.46□□□□□ -0.25
Sox2P48432 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.46□□□□□ -0.25
Sox2P48432 Gm2451-201ENSMUST00000199447 999 ntBASIC13.46□□□□□ -0.25
Sox2P48432 Gm10290-201ENSMUST00000200451 999 ntBASIC13.46□□□□□ -0.25
Sox2P48432 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox2P48432 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
Sox2P48432 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.46□□□□□ -0.26
Sox2P48432 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sox2P48432 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Sox2P48432 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox2P48432 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.45□□□□□ -0.26
Sox2P48432 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
Sox2P48432 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox2P48432 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sox2P48432 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox2P48432 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox2P48432 Gm14042-201ENSMUST00000120139 833 ntBASIC13.45□□□□□ -0.26
Sox2P48432 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Gm4899-201ENSMUST00000178708 719 ntBASIC13.45□□□□□ -0.26
Sox2P48432 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox2P48432 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox2P48432 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Sox2P48432 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox2P48432 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.45□□□□□ -0.26
Sox2P48432 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox2P48432 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox2P48432 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.44□□□□□ -0.26
Sox2P48432 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sox2P48432 Gm11764-201ENSMUST00000120221 623 ntBASIC13.44□□□□□ -0.26
Sox2P48432 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.44□□□□□ -0.26
Sox2P48432 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.44□□□□□ -0.26
Sox2P48432 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox2P48432 Olfr286-202ENSMUST00000205305 969 ntBASIC13.44□□□□□ -0.26
Sox2P48432 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.44□□□□□ -0.26
Sox2P48432 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms