Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 AW822252-206ENSMUST00000208904 237 ntBASIC12.96□□□□□ -0.33
Rfx3P48381 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.96□□□□□ -0.33
Rfx3P48381 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rfx3P48381 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx3P48381 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Rfx3P48381 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rfx3P48381 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx3P48381 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rfx3P48381 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfx3P48381 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rfx3P48381 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.95□□□□□ -0.34
Rfx3P48381 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.95□□□□□ -0.34
Rfx3P48381 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rfx3P48381 Gm9726-201ENSMUST00000180321 678 ntBASIC12.95□□□□□ -0.34
Rfx3P48381 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.95□□□□□ -0.34
Rfx3P48381 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Thap2-203ENSMUST00000218989 527 ntBASIC12.95□□□□□ -0.34
Rfx3P48381 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfx3P48381 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.95□□□□□ -0.34
Rfx3P48381 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rfx3P48381 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rfx3P48381 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rfx3P48381 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx3P48381 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfx3P48381 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Rfx3P48381 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfx3P48381 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rfx3P48381 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfx3P48381 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Gm8749-201ENSMUST00000117737 331 ntBASIC12.94□□□□□ -0.34
Rfx3P48381 Gm1401-201ENSMUST00000122048 772 ntBASIC12.94□□□□□ -0.34
Rfx3P48381 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Rfx3P48381 Gm16026-204ENSMUST00000162652 683 ntBASIC12.94□□□□□ -0.34
Rfx3P48381 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.94□□□□□ -0.34
Rfx3P48381 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.94□□□□□ -0.34
Rfx3P48381 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Rfx3P48381 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms