Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.75□□□□□ -0.21
Sox18P43680 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Sox18P43680 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Gm12813-201ENSMUST00000119615 902 ntBASIC13.75□□□□□ -0.21
Sox18P43680 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.75□□□□□ -0.21
Sox18P43680 Mir1894-201ENSMUST00000122802 81 ntBASIC13.75□□□□□ -0.21
Sox18P43680 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Gm6244-201ENSMUST00000178732 841 ntBASIC13.75□□□□□ -0.21
Sox18P43680 Mir7654-201ENSMUST00000185082 70 ntBASIC13.75□□□□□ -0.21
Sox18P43680 Gm18351-201ENSMUST00000188646 883 ntBASIC13.75□□□□□ -0.21
Sox18P43680 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.75□□□□□ -0.21
Sox18P43680 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Sox18P43680 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox18P43680 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox18P43680 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 BC037039-201ENSMUST00000192003 2205 ntBASIC13.74□□□□□ -0.21
Sox18P43680 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.74□□□□□ -0.21
Sox18P43680 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Sox18P43680 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox18P43680 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.74□□□□□ -0.21
Sox18P43680 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox18P43680 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox18P43680 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.74□□□□□ -0.21
Sox18P43680 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.74□□□□□ -0.21
Sox18P43680 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox18P43680 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox18P43680 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.73□□□□□ -0.21
Sox18P43680 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.73□□□□□ -0.21
Sox18P43680 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox18P43680 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms