Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Gm14042-201ENSMUST00000120139 833 ntBASIC11.83□□□□□ -0.52
Cdkn1aP39689 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Gm27838-201ENSMUST00000184829 128 ntBASIC11.83□□□□□ -0.52
Cdkn1aP39689 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.83□□□□□ -0.52
Cdkn1aP39689 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn1aP39689 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.82□□□□□ -0.52
Cdkn1aP39689 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Gm14719-201ENSMUST00000121891 340 ntBASIC11.82□□□□□ -0.52
Cdkn1aP39689 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Gm16215-201ENSMUST00000161990 637 ntBASIC11.82□□□□□ -0.52
Cdkn1aP39689 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Gm3436-201ENSMUST00000179930 840 ntBASIC11.82□□□□□ -0.52
Cdkn1aP39689 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.82□□□□□ -0.52
Cdkn1aP39689 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Gm2423-201ENSMUST00000074863 733 ntBASIC11.82□□□□□ -0.52
Cdkn1aP39689 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Cdkn1aP39689 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.81□□□□□ -0.52
Cdkn1aP39689 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 BC001981-202ENSMUST00000191393 1545 ntBASIC11.81□□□□□ -0.52
Cdkn1aP39689 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Gm4875-201ENSMUST00000118257 786 ntBASIC11.81□□□□□ -0.52
Cdkn1aP39689 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Gm43703-201ENSMUST00000200523 763 ntBASIC11.81□□□□□ -0.52
Cdkn1aP39689 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Gm9229-201ENSMUST00000222777 126 ntBASIC11.81□□□□□ -0.52
Cdkn1aP39689 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.81□□□□□ -0.52
Cdkn1aP39689 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdkn1aP39689 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms