Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.15□□□□□ -0.14
HmgclP38060 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HmgclP38060 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HmgclP38060 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.14□□□□□ -0.15
HmgclP38060 Gm6222-201ENSMUST00000120787 396 ntBASIC14.14□□□□□ -0.15
HmgclP38060 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Gm10253-201ENSMUST00000194270 940 ntBASIC14.14□□□□□ -0.15
HmgclP38060 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HmgclP38060 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HmgclP38060 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.14□□□□□ -0.15
HmgclP38060 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.14□□□□□ -0.15
HmgclP38060 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HmgclP38060 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HmgclP38060 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.13□□□□□ -0.15
HmgclP38060 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HmgclP38060 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.13□□□□□ -0.15
HmgclP38060 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HmgclP38060 Gm5566-201ENSMUST00000116118 459 ntBASIC14.13□□□□□ -0.15
HmgclP38060 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.13□□□□□ -0.15
HmgclP38060 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.13□□□□□ -0.15
HmgclP38060 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.13□□□□□ -0.15
HmgclP38060 AA619741-201ENSMUST00000195095 646 ntBASIC14.13□□□□□ -0.15
HmgclP38060 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.13□□□□□ -0.15
HmgclP38060 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HmgclP38060 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HmgclP38060 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HmgclP38060 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
HmgclP38060 BC001981-202ENSMUST00000191393 1545 ntBASIC14.12□□□□□ -0.15
HmgclP38060 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HmgclP38060 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HmgclP38060 Mir449b-201ENSMUST00000104833 80 ntBASIC14.12□□□□□ -0.15
HmgclP38060 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
HmgclP38060 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HmgclP38060 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
HmgclP38060 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.11□□□□□ -0.15
HmgclP38060 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.11□□□□□ -0.15
HmgclP38060 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms