Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.41□□□□□ -0.1
RxrbP28704 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RxrbP28704 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RxrbP28704 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RxrbP28704 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Gm24589-201ENSMUST00000116692 94 ntBASIC14.4□□□□□ -0.1
RxrbP28704 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.4□□□□□ -0.1
RxrbP28704 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.4□□□□□ -0.1
RxrbP28704 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RxrbP28704 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxrbP28704 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RxrbP28704 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RxrbP28704 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
RxrbP28704 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
RxrbP28704 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RxrbP28704 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RxrbP28704 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RxrbP28704 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
RxrbP28704 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.39□□□□□ -0.11
RxrbP28704 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RxrbP28704 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RxrbP28704 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.38□□□□□ -0.11
RxrbP28704 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.38□□□□□ -0.11
RxrbP28704 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
RxrbP28704 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RxrbP28704 AV026068-213ENSMUST00000223675 1171 ntBASIC14.38□□□□□ -0.11
RxrbP28704 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RxrbP28704 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.38□□□□□ -0.11
RxrbP28704 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.38□□□□□ -0.11
RxrbP28704 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms