Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nckap1P28660 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nckap1P28660 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.26□□□□□ -0.13
Nckap1P28660 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nckap1P28660 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nckap1P28660 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Nckap1P28660 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Nckap1P28660 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.25□□□□□ -0.13
Nckap1P28660 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.25□□□□□ -0.13
Nckap1P28660 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nckap1P28660 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.25□□□□□ -0.13
Nckap1P28660 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nckap1P28660 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nckap1P28660 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Nckap1P28660 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nckap1P28660 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nckap1P28660 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nckap1P28660 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.24□□□□□ -0.13
Nckap1P28660 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nckap1P28660 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nckap1P28660 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.24□□□□□ -0.13
Nckap1P28660 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.24□□□□□ -0.13
Nckap1P28660 Gm9522-201ENSMUST00000182394 926 ntBASIC14.24□□□□□ -0.13
Nckap1P28660 Gm33320-201ENSMUST00000192232 530 ntBASIC14.24□□□□□ -0.13
Nckap1P28660 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.24□□□□□ -0.13
Nckap1P28660 Gm6916-202ENSMUST00000205523 195 ntBASIC14.24□□□□□ -0.13
Nckap1P28660 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.24□□□□□ -0.13
Nckap1P28660 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.24□□□□□ -0.13
Nckap1P28660 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.24□□□□□ -0.13
Nckap1P28660 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Nckap1P28660 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nckap1P28660 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nckap1P28660 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nckap1P28660 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms