Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.97□□□□□ -0.49
Col8a2P25318 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col8a2P25318 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.97□□□□□ -0.49
Col8a2P25318 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col8a2P25318 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.97□□□□□ -0.49
Col8a2P25318 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.97□□□□□ -0.49
Col8a2P25318 Mir125a-201ENSMUST00000083545 68 ntBASIC11.97□□□□□ -0.49
Col8a2P25318 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.97□□□□□ -0.49
Col8a2P25318 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.97□□□□□ -0.49
Col8a2P25318 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.96□□□□□ -0.49
Col8a2P25318 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.96□□□□□ -0.49
Col8a2P25318 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col8a2P25318 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.96□□□□□ -0.49
Col8a2P25318 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.96□□□□□ -0.49
Col8a2P25318 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Gm25144-201ENSMUST00000179561 110 ntBASIC11.96□□□□□ -0.49
Col8a2P25318 Gm25352-201ENSMUST00000179815 110 ntBASIC11.96□□□□□ -0.49
Col8a2P25318 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.96□□□□□ -0.49
Col8a2P25318 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.96□□□□□ -0.49
Col8a2P25318 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col8a2P25318 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col8a2P25318 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col8a2P25318 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col8a2P25318 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col8a2P25318 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Col8a2P25318 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.95□□□□□ -0.5
Col8a2P25318 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col8a2P25318 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.95□□□□□ -0.5
Col8a2P25318 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.95□□□□□ -0.5
Col8a2P25318 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.95□□□□□ -0.5
Col8a2P25318 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.95□□□□□ -0.5
Col8a2P25318 Gm4875-201ENSMUST00000118257 786 ntBASIC11.95□□□□□ -0.5
Col8a2P25318 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.95□□□□□ -0.5
Col8a2P25318 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col8a2P25318 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.95□□□□□ -0.5
Col8a2P25318 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col8a2P25318 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col8a2P25318 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Col8a2P25318 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col8a2P25318 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Col8a2P25318 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col8a2P25318 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms