Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.76□□□□□ -0.21
BdnfP21237 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
BdnfP21237 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.76□□□□□ -0.21
BdnfP21237 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
BdnfP21237 Gm2651-201ENSMUST00000203560 838 ntBASIC13.76□□□□□ -0.21
BdnfP21237 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.76□□□□□ -0.21
BdnfP21237 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.76□□□□□ -0.21
BdnfP21237 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.76□□□□□ -0.21
BdnfP21237 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.76□□□□□ -0.21
BdnfP21237 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.76□□□□□ -0.21
BdnfP21237 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BdnfP21237 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.75□□□□□ -0.21
BdnfP21237 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.75□□□□□ -0.21
BdnfP21237 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.75□□□□□ -0.21
BdnfP21237 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.75□□□□□ -0.21
BdnfP21237 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.75□□□□□ -0.21
BdnfP21237 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.75□□□□□ -0.21
BdnfP21237 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BdnfP21237 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
BdnfP21237 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BdnfP21237 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
BdnfP21237 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
BdnfP21237 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BdnfP21237 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.75□□□□□ -0.21
BdnfP21237 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
BdnfP21237 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.74□□□□□ -0.21
BdnfP21237 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.74□□□□□ -0.21
BdnfP21237 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.74□□□□□ -0.21
BdnfP21237 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.74□□□□□ -0.21
BdnfP21237 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
BdnfP21237 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
BdnfP21237 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms