Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Ccl1P10146 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Ccl1P10146 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.12□□□□□ -0.63
Ccl1P10146 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.12□□□□□ -0.63
Ccl1P10146 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.12□□□□□ -0.63
Ccl1P10146 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.12□□□□□ -0.63
Ccl1P10146 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.12□□□□□ -0.63
Ccl1P10146 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.11□□□□□ -0.63
Ccl1P10146 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccl1P10146 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccl1P10146 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccl1P10146 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl1P10146 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl1P10146 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Ccl1P10146 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl1P10146 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccl1P10146 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl1P10146 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl1P10146 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.1□□□□□ -0.63
Ccl1P10146 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.1□□□□□ -0.63
Ccl1P10146 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccl1P10146 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccl1P10146 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccl1P10146 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.1□□□□□ -0.63
Ccl1P10146 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Ccl1P10146 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl1P10146 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ccl1P10146 Gm15165-201ENSMUST00000118140 502 ntBASIC11.1□□□□□ -0.63
Ccl1P10146 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms