Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.62■□□□□ 0.09
Chmp6P0C0A3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Gm38225-201ENSMUST00000194001 393 ntBASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp6P0C0A3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Carlr-201ENSMUST00000181515 2574 ntBASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp6P0C0A3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms