Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.38□□□□□ -0.27
Sod1P08228 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.38□□□□□ -0.27
Sod1P08228 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sod1P08228 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.38□□□□□ -0.27
Sod1P08228 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Sod1P08228 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sod1P08228 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.37□□□□□ -0.27
Sod1P08228 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Mir1938-201ENSMUST00000158746 100 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Sod1P08228 Gm7287-201ENSMUST00000205267 602 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Mir497b-201ENSMUST00000093601 125 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sod1P08228 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sod1P08228 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.37□□□□□ -0.27
Sod1P08228 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Sod1P08228 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.37□□□□□ -0.27
Sod1P08228 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Sod1P08228 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sod1P08228 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.36□□□□□ -0.27
Sod1P08228 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.36□□□□□ -0.27
Sod1P08228 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.36□□□□□ -0.27
Sod1P08228 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.36□□□□□ -0.27
Sod1P08228 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.36□□□□□ -0.27
Sod1P08228 Gm27772-201ENSMUST00000184900 187 ntBASIC13.36□□□□□ -0.27
Sod1P08228 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.36□□□□□ -0.27
Sod1P08228 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
Sod1P08228 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sod1P08228 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sod1P08228 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sod1P08228 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
Sod1P08228 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.36□□□□□ -0.27
Sod1P08228 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sod1P08228 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sod1P08228 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sod1P08228 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sod1P08228 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sod1P08228 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.35□□□□□ -0.27
Sod1P08228 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sod1P08228 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms