Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
TcraP01849 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
TcraP01849 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Gm7284-201ENSMUST00000131667 944 ntBASIC10.48□□□□□ -0.73
TcraP01849 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.48□□□□□ -0.73
TcraP01849 Mir3081-201ENSMUST00000175305 84 ntBASIC10.48□□□□□ -0.73
TcraP01849 Gm44454-201ENSMUST00000198541 138 ntBASIC10.48□□□□□ -0.73
TcraP01849 Gm9172-201ENSMUST00000212092 954 ntBASIC10.48□□□□□ -0.73
TcraP01849 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
TcraP01849 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.48□□□□□ -0.73
TcraP01849 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
TcraP01849 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
TcraP01849 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.48□□□□□ -0.73
TcraP01849 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
TcraP01849 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.47□□□□□ -0.73
TcraP01849 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.47□□□□□ -0.73
TcraP01849 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.47□□□□□ -0.73
TcraP01849 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.47□□□□□ -0.73
TcraP01849 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
TcraP01849 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
TcraP01849 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
TcraP01849 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
TcraP01849 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
TcraP01849 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
TcraP01849 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TcraP01849 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.46□□□□□ -0.73
TcraP01849 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
TcraP01849 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
TcraP01849 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
TcraP01849 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.46□□□□□ -0.73
TcraP01849 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.46□□□□□ -0.73
TcraP01849 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.46□□□□□ -0.73
TcraP01849 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.46□□□□□ -0.73
TcraP01849 Gm33142-201ENSMUST00000193913 867 ntBASIC10.46□□□□□ -0.73
TcraP01849 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.46□□□□□ -0.73
TcraP01849 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.46□□□□□ -0.73
TcraP01849 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
TcraP01849 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.46□□□□□ -0.74
TcraP01849 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
TcraP01849 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms