Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Gm25287-201ENSMUST00000103846 110 ntBASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Gm22918-201ENSMUST00000103855 110 ntBASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igh-VJ558P01758 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 BC001981-202ENSMUST00000191393 1545 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm15957-201ENSMUST00000118893 974 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm11594-201ENSMUST00000122313 162 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm18049-201ENSMUST00000208909 581 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igh-VJ558P01758 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms