Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl13O55038 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.11□□□□□ -0.47
Cxcl13O55038 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl13O55038 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.11□□□□□ -0.47
Cxcl13O55038 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl13O55038 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.1□□□□□ -0.47
Cxcl13O55038 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Gm22189-201ENSMUST00000103822 86 ntBASIC12.1□□□□□ -0.47
Cxcl13O55038 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.1□□□□□ -0.47
Cxcl13O55038 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.1□□□□□ -0.47
Cxcl13O55038 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.1□□□□□ -0.47
Cxcl13O55038 Gm5186-201ENSMUST00000218781 920 ntBASIC12.1□□□□□ -0.47
Cxcl13O55038 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.1□□□□□ -0.47
Cxcl13O55038 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl13O55038 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl13O55038 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Gm11424-201ENSMUST00000121929 829 ntBASIC12.09□□□□□ -0.47
Cxcl13O55038 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.09□□□□□ -0.47
Cxcl13O55038 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl13O55038 Gm21854-201ENSMUST00000179901 471 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms