Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Rnf13O54965 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.02□□□□□ -0.33
Rnf13O54965 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.02□□□□□ -0.33
Rnf13O54965 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rnf13O54965 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Rnf13O54965 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf13O54965 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.01□□□□□ -0.33
Rnf13O54965 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Rnf13O54965 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Rnf13O54965 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf13O54965 Gm7862-201ENSMUST00000121461 292 ntBASIC13.01□□□□□ -0.33
Rnf13O54965 Gm11452-201ENSMUST00000122376 690 ntBASIC13.01□□□□□ -0.33
Rnf13O54965 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf13O54965 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.01□□□□□ -0.33
Rnf13O54965 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.01□□□□□ -0.33
Rnf13O54965 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.01□□□□□ -0.33
Rnf13O54965 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf13O54965 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf13O54965 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.01□□□□□ -0.33
Rnf13O54965 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf13O54965 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.01□□□□□ -0.33
Rnf13O54965 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf13O54965 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rnf13O54965 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13□□□□□ -0.33
Rnf13O54965 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13□□□□□ -0.33
Rnf13O54965 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13□□□□□ -0.33
Rnf13O54965 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13□□□□□ -0.33
Rnf13O54965 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13□□□□□ -0.33
Rnf13O54965 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rnf13O54965 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13□□□□□ -0.33
Rnf13O54965 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rnf13O54965 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf13O54965 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.99□□□□□ -0.33
Rnf13O54965 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rnf13O54965 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf13O54965 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf13O54965 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms