Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.04□□□□□ -0.32
Matn3O35701 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Matn3O35701 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.04□□□□□ -0.32
Matn3O35701 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.04□□□□□ -0.32
Matn3O35701 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.04□□□□□ -0.32
Matn3O35701 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Gm18041-201ENSMUST00000218210 618 ntBASIC13.04□□□□□ -0.32
Matn3O35701 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Matn3O35701 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Matn3O35701 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Matn3O35701 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Matn3O35701 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.03□□□□□ -0.32
Matn3O35701 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Matn3O35701 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.03□□□□□ -0.32
Matn3O35701 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Matn3O35701 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.03□□□□□ -0.32
Matn3O35701 Mzt1-203ENSMUST00000227948 952 ntBASIC13.03□□□□□ -0.32
Matn3O35701 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Matn3O35701 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Matn3O35701 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Matn3O35701 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Matn3O35701 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Matn3O35701 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn3O35701 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn3O35701 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.02□□□□□ -0.32
Matn3O35701 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.02□□□□□ -0.32
Matn3O35701 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn3O35701 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.02□□□□□ -0.32
Matn3O35701 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn3O35701 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn3O35701 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Matn3O35701 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.02□□□□□ -0.32
Matn3O35701 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn3O35701 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Gm4459-201ENSMUST00000118750 468 ntBASIC13.02□□□□□ -0.33
Matn3O35701 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Matn3O35701 Gm28659-201ENSMUST00000188013 759 ntBASIC13.02□□□□□ -0.33
Matn3O35701 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.02□□□□□ -0.33
Matn3O35701 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.02□□□□□ -0.33
Matn3O35701 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Matn3O35701 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Matn3O35701 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn3O35701 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms