Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac1O09106 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac1O09106 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.05■□□□□ 0.32
Hdac1O09106 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hdac1O09106 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hdac1O09106 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hdac1O09106 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.04■□□□□ 0.32
Hdac1O09106 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.04■□□□□ 0.32
Hdac1O09106 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.04■□□□□ 0.32
Hdac1O09106 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.04■□□□□ 0.32
Hdac1O09106 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hdac1O09106 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.04■□□□□ 0.32
Hdac1O09106 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac1O09106 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac1O09106 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hdac1O09106 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.03■□□□□ 0.32
Hdac1O09106 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hdac1O09106 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.03■□□□□ 0.32
Hdac1O09106 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.03■□□□□ 0.32
Hdac1O09106 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hdac1O09106 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.03■□□□□ 0.32
Hdac1O09106 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac1O09106 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac1O09106 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hdac1O09106 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hdac1O09106 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hdac1O09106 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.02■□□□□ 0.32
Hdac1O09106 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac1O09106 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac1O09106 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac1O09106 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Hdac1O09106 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.01■□□□□ 0.31
Hdac1O09106 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.01■□□□□ 0.31
Hdac1O09106 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.01■□□□□ 0.31
Hdac1O09106 Gm27920-201ENSMUST00000183953 96 ntBASIC17.01■□□□□ 0.31
Hdac1O09106 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.01■□□□□ 0.31
Hdac1O09106 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Hdac1O09106 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.01■□□□□ 0.31
Hdac1O09106 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.01■□□□□ 0.31
Hdac1O09106 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac1O09106 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.01■□□□□ 0.31
Hdac1O09106 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.01■□□□□ 0.31
Hdac1O09106 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Hdac1O09106 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hdac1O09106 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms