Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.72□□□□□ -0.37
Raet1aO08602 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Gm38225-201ENSMUST00000194001 393 ntBASIC12.72□□□□□ -0.37
Raet1aO08602 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.72□□□□□ -0.37
Raet1aO08602 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.72□□□□□ -0.37
Raet1aO08602 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Raet1aO08602 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Raet1aO08602 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.71□□□□□ -0.37
Raet1aO08602 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Raet1aO08602 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.71□□□□□ -0.37
Raet1aO08602 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Gm13365-201ENSMUST00000121188 973 ntBASIC12.71□□□□□ -0.37
Raet1aO08602 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.71□□□□□ -0.37
Raet1aO08602 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.71□□□□□ -0.37
Raet1aO08602 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Raet1aO08602 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.71□□□□□ -0.37
Raet1aO08602 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.71□□□□□ -0.37
Raet1aO08602 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Raet1aO08602 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Raet1aO08602 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Raet1aO08602 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.71□□□□□ -0.37
Raet1aO08602 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Raet1aO08602 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.71□□□□□ -0.37
Raet1aO08602 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Raet1aO08602 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Raet1aO08602 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Raet1aO08602 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Raet1aO08602 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Raet1aO08602 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Raet1aO08602 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.7□□□□□ -0.38
Raet1aO08602 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.7□□□□□ -0.38
Raet1aO08602 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.7□□□□□ -0.38
Raet1aO08602 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Raet1aO08602 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.7□□□□□ -0.38
Raet1aO08602 Gm18889-201ENSMUST00000174284 929 ntBASIC12.7□□□□□ -0.38
Raet1aO08602 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.7□□□□□ -0.38
Raet1aO08602 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.7□□□□□ -0.38
Raet1aO08602 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Raet1aO08602 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Raet1aO08602 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Raet1aO08602 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Raet1aO08602 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Raet1aO08602 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Raet1aO08602 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Raet1aO08602 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms