Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
B020004C17RikJ3QP07 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
B020004C17RikJ3QP07 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
B020004C17RikJ3QP07 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.14
B020004C17RikJ3QP07 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Gm38223-201ENSMUST00000194484 695 ntBASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
B020004C17RikJ3QP07 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
B020004C17RikJ3QP07 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Gm12384-201ENSMUST00000119228 919 ntBASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Gm38671-201ENSMUST00000200573 130 ntBASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
B020004C17RikJ3QP07 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms