Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.18□□□□□ -0.46
Gm3727J3QM54 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3727J3QM54 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.17□□□□□ -0.46
Gm3727J3QM54 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Mir3081-201ENSMUST00000175305 84 ntBASIC12.17□□□□□ -0.46
Gm3727J3QM54 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Gm8655-201ENSMUST00000221159 852 ntBASIC12.17□□□□□ -0.46
Gm3727J3QM54 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3727J3QM54 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Gm15794-201ENSMUST00000120182 631 ntBASIC12.16□□□□□ -0.46
Gm3727J3QM54 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Gm11950-201ENSMUST00000121615 838 ntBASIC12.16□□□□□ -0.46
Gm3727J3QM54 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.16□□□□□ -0.46
Gm3727J3QM54 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.16□□□□□ -0.46
Gm3727J3QM54 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.16□□□□□ -0.46
Gm3727J3QM54 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3727J3QM54 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.15□□□□□ -0.46
Gm3727J3QM54 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gm3727J3QM54 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms