Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Gm16026-204ENSMUST00000162652 683 ntBASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Gm10060-201ENSMUST00000212002 111 ntBASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh1F7BJK1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Pcdh1F7BJK1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh1F7BJK1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh1F7BJK1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Gm37230-201ENSMUST00000194491 818 ntBASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Gm9182-201ENSMUST00000217829 639 ntBASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms