Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Gm14719-201ENSMUST00000121891 340 ntBASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb9E9Q5G2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb9E9Q5G2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb9E9Q5G2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhb9E9Q5G2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Gm15460-201ENSMUST00000118147 391 ntBASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb9E9Q5G2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Gm27838-201ENSMUST00000184829 128 ntBASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb9E9Q5G2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Gm29667-201ENSMUST00000190817 490 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms