Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cpsf4lE9Q2N0 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.15□□□□□ -0.47
Cpsf4lE9Q2N0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Cpsf4lE9Q2N0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cpsf4lE9Q2N0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cpsf4lE9Q2N0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Gm5566-201ENSMUST00000116118 459 ntBASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Gm12882-201ENSMUST00000121696 517 ntBASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Gm9719-201ENSMUST00000162765 543 ntBASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Gm27631-201ENSMUST00000184163 466 ntBASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4lE9Q2N0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Gm15693-201ENSMUST00000120470 637 ntBASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4lE9Q2N0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpsf4lE9Q2N0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms