Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Gm33320-201ENSMUST00000192232 530 ntBASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Gm42612-201ENSMUST00000197986 623 ntBASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Gm43170-201ENSMUST00000199827 612 ntBASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Gm9794-201ENSMUST00000202370 423 ntBASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srp54bE9PXC0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Gm22189-201ENSMUST00000103822 86 ntBASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Gm14928-201ENSMUST00000120198 477 ntBASIC14.1□□□□□ -0.15
Srp54bE9PXC0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Gm28631-201ENSMUST00000190740 334 ntBASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Srp54bE9PXC0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Gm12585-201ENSMUST00000117307 290 ntBASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.09□□□□□ -0.15
Srp54bE9PXC0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Gm7653-201ENSMUST00000214567 508 ntBASIC14.09□□□□□ -0.15
Srp54bE9PXC0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms