Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp42B2RQC2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.74■□□□□ 0.27
Usp42B2RQC2 Gm13223-201ENSMUST00000118609 747 ntBASIC16.74■□□□□ 0.27
Usp42B2RQC2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.74■□□□□ 0.27
Usp42B2RQC2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp42B2RQC2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Mir1897-201ENSMUST00000122581 272 ntBASIC16.73■□□□□ 0.27
Usp42B2RQC2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.73■□□□□ 0.27
Usp42B2RQC2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Usp42B2RQC2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.73■□□□□ 0.27
Usp42B2RQC2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.72■□□□□ 0.27
Usp42B2RQC2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp42B2RQC2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms