Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Gm13464-201ENSMUST00000119418 935 ntBASIC14.54□□□□□ -0.08
Gm5640A3KG49 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm5640A3KG49 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Gm8584-201ENSMUST00000171982 758 ntBASIC14.53□□□□□ -0.08
Gm5640A3KG49 Gm7977-201ENSMUST00000193787 748 ntBASIC14.53□□□□□ -0.08
Gm5640A3KG49 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.53□□□□□ -0.08
Gm5640A3KG49 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.53□□□□□ -0.08
Gm5640A3KG49 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm5640A3KG49 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm5640A3KG49 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Gm5640A3KG49 Gm15372-201ENSMUST00000120729 834 ntBASIC14.52□□□□□ -0.09
Gm5640A3KG49 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms