Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm6659-201ENSMUST00000174752 547 ntBASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm25745-201ENSMUST00000174945 133 ntBASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.88□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm4459-201ENSMUST00000118750 468 ntBASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm15358-201ENSMUST00000119249 520 ntBASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms