Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5-4A0A075B652 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5-4A0A075B652 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav5-4A0A075B652 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav5-4A0A075B652 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav5-4A0A075B652 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Gm27741-201ENSMUST00000185060 237 ntBASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav5-4A0A075B652 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Gm16198-201ENSMUST00000118766 670 ntBASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Gm14140-201ENSMUST00000119999 995 ntBASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Thap2-203ENSMUST00000218989 527 ntBASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms