Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav8-1A0A075B641 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm8825-201ENSMUST00000182565 998 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm4518-201ENSMUST00000182638 718 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav8-1A0A075B641 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms