Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.83□□□□□ -0.2
Cldn9Q9Z0S7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn9Q9Z0S7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cldn9Q9Z0S7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms