Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Gm9726-201ENSMUST00000180321 678 ntBASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Gm8396-201ENSMUST00000057361 823 ntBASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn13Q9Z0S4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Gm43474-201ENSMUST00000196415 774 ntBASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Gm43125-201ENSMUST00000201724 730 ntBASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn13Q9Z0S4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Gm13464-201ENSMUST00000119418 935 ntBASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms