Protein–RNA interactions for Protein: Q9WV55

Vapa, Vesicle-associated membrane protein-associated protein A, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VapaQ9WV55 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
VapaQ9WV55 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
VapaQ9WV55 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
VapaQ9WV55 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VapaQ9WV55 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VapaQ9WV55 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.71□□□□□ -0.22
VapaQ9WV55 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VapaQ9WV55 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VapaQ9WV55 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
VapaQ9WV55 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VapaQ9WV55 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.7□□□□□ -0.22
VapaQ9WV55 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.7□□□□□ -0.22
VapaQ9WV55 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.7□□□□□ -0.22
VapaQ9WV55 Gm15483-201ENSMUST00000120338 456 ntBASIC13.7□□□□□ -0.22
VapaQ9WV55 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.7□□□□□ -0.22
VapaQ9WV55 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.7□□□□□ -0.22
VapaQ9WV55 Gm17968-201ENSMUST00000194902 784 ntBASIC13.7□□□□□ -0.22
VapaQ9WV55 Gm2651-201ENSMUST00000203560 838 ntBASIC13.7□□□□□ -0.22
VapaQ9WV55 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VapaQ9WV55 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VapaQ9WV55 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.7□□□□□ -0.22
VapaQ9WV55 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VapaQ9WV55 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VapaQ9WV55 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.69□□□□□ -0.22
VapaQ9WV55 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VapaQ9WV55 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.69□□□□□ -0.22
VapaQ9WV55 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.69□□□□□ -0.22
VapaQ9WV55 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VapaQ9WV55 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
VapaQ9WV55 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.69□□□□□ -0.22
VapaQ9WV55 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VapaQ9WV55 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Matn2-206ENSMUST00000228570 2798 ntBASIC13.68□□□□□ -0.22
VapaQ9WV55 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Gm8584-201ENSMUST00000171982 758 ntBASIC13.68□□□□□ -0.22
VapaQ9WV55 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.68□□□□□ -0.22
VapaQ9WV55 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.68□□□□□ -0.22
VapaQ9WV55 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VapaQ9WV55 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VapaQ9WV55 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VapaQ9WV55 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VapaQ9WV55 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VapaQ9WV55 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms