Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim3Q9R1R2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim3Q9R1R2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Gm11745-201ENSMUST00000121669 448 ntBASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim3Q9R1R2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim3Q9R1R2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim3Q9R1R2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim3Q9R1R2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim3Q9R1R2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim3Q9R1R2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim3Q9R1R2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim3Q9R1R2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim3Q9R1R2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms