Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Gm15427-201ENSMUST00000117288 531 ntBASIC13.99□□□□□ -0.17
Cdh17Q9R100 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.99□□□□□ -0.17
Cdh17Q9R100 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Gm44492-201ENSMUST00000197012 141 ntBASIC13.99□□□□□ -0.17
Cdh17Q9R100 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.99□□□□□ -0.17
Cdh17Q9R100 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh17Q9R100 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.98□□□□□ -0.17
Cdh17Q9R100 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Gm9727-201ENSMUST00000161387 555 ntBASIC13.98□□□□□ -0.17
Cdh17Q9R100 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdh17Q9R100 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh17Q9R100 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Gm6973-201ENSMUST00000117080 721 ntBASIC13.97□□□□□ -0.17
Cdh17Q9R100 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.97□□□□□ -0.17
Cdh17Q9R100 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.97□□□□□ -0.17
Cdh17Q9R100 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.97□□□□□ -0.17
Cdh17Q9R100 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.97□□□□□ -0.17
Cdh17Q9R100 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh17Q9R100 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms